Publications

SABmark - a benchmark for sequence alignment that covers the entire known fold space
Van Walle I, Lasters I, Wyns L (2005) Bioinformatics 21:1267-68
[Abstract] [Full Text]

Align-m - a new algorithm for multiple alignment of highly divergent sequences
Van Walle I, Lasters I, Wyns L (2004) Bioinformatics 20:1428-35
[Abstract] [Full Text]

PDB parser and structure class implemented in Python
Hamelryck T W, Manderick B (2003) Bioinformatics 19:2308-10
[Abstract]

Efficient identification of side-chain patterns using a multidimensional index tree
Hamelryck T (2003) Proteins 51:96-108
[Abstract]

Consistency matrices: quantified structure alignments for sets of related proteins
Van Walle I, Lasters I, Wyns L (2003) Proteins 51:1-9
[Abstract]